Archive for debiasing

simulating hazard

Posted in Books, Kids, pictures, Statistics, Travel with tags , , , , , , , , , , , , on May 26, 2020 by xi'an

A rather straightforward X validated question that however leads to an interesting simulation question: when given the hazard function h(·), rather than the probability density f(·), how does one simulate this distribution? Mathematically h(·) identifies the probability distribution as much as f(·),

1-F(x)=\exp\left\{ \int_{-\infty}^x h(t)\,\text{d}t \right\}=\exp\{H(x)\}

which means cdf inversion could be implemented in principle. But in practice, assuming the integral is intractable, what would an exact solution look like? Including MCMC versions exploiting one fixed point representation or the other.. Since

f(x)=h(x)\,\exp\left\{ \int_{-\infty}^x h(t)\,\text{d}t \right\}

using an unbiased estimator of the exponential term in a pseudo-marginal algorithm would work. And getting an unbiased estimator of the exponential term can be done by Glynn & Rhee debiasing. But this is rather costly… Having Devroye’s book under my nose [at my home desk] should however have driven me earlier to the obvious solution to… simply open it!!! A whole section (VI.2) is indeed dedicated to simulations when the distribution is given by the hazard rate. (Which made me realise this problem is related with PDMPs in that thinning and composition tricks are common to both.) Besides the inversion method, ie X=H⁻¹(U), Devroye suggests thinning a Poisson process when h(·) is bounded by a manageable g(·). Or a generic dynamic thinning approach that converges when h(·) is non-increasing.

Russian roulette still rolling

Posted in Statistics with tags , , , , , , , , , , , , on March 22, 2017 by xi'an

Colin Wei and Iain Murray arXived a new version of their paper on doubly-intractable distributions, which is to be presented at AISTATS. It builds upon the Russian roulette estimator of Lyne et al. (2015), which itself exploits the debiasing technique of McLeish et al. (2011) [found earlier in the physics literature as in Carter and Cashwell, 1975, according to the current paper]. Such an unbiased estimator of the inverse of the normalising constant can be used for pseudo-marginal MCMC, except that the estimator is sometimes negative and has to be so as proved by Pierre Jacob and co-authors. As I discussed in my post on the Russian roulette estimator, replacing the negative estimate with its absolute value does not seem right because a negative value indicates that the quantity is close to zero, hence replacing it with zero would sound more appropriate. Wei and Murray start from the property that, while the expectation of the importance weight is equal to the normalising constant, the expectation of the inverse of the importance weight converges to the inverse of the weight for an MCMC chain. This however sounds like an harmonic mean estimate because the property would also stand for any substitute to the importance density, as it only requires the density to integrate to one… As noted in the paper, the variance of the resulting Roulette estimator “will be high” or even infinite. Following Glynn et al. (2014), the authors build a coupled version of that solution, which key feature is to cut the higher order terms in the debiasing estimator. This does not guarantee finite variance or positivity of the estimate, though. In order to decrease the variance (assuming it is finite), backward coupling is introduced, with a Rao-Blackwellisation step using our 1996 Biometrika derivation. Which happens to be of lower cost than the standard Rao-Blackwellisation in that special case, O(N) versus O(N²), N being the stopping rule used in the debiasing estimator. Under the assumption that the inverse importance weight has finite expectation [wrt the importance density], the resulting backward-coupling Russian roulette estimator can be proven to be unbiased, as it enjoys a finite expectation. (As in the generalised harmonic mean case, the constraint imposes thinner tails on the importance function, which then hampers the convergence of the MCMC chain.) No mention is made of achieving finite variance for those estimators, which again is a serious concern due to the similarity with harmonic means…

retrospective Monte Carlo

Posted in pictures, Running, Statistics, Travel, University life with tags , , , , , , , , , , on July 12, 2016 by xi'an

the pond in front of the Zeeman building, University of Warwick, July 01, 2014The past week I spent in Warwick ended up with a workshop on retrospective Monte Carlo, which covered exact sampling, debiasing, Bernoulli factory problems and multi-level Monte Carlo, a definitely exciting package! (Not to mention opportunities to go climbing with some participants.) In particular, several talks focussed on the debiasing technique of Rhee and Glynn (2012) [inspired from von Neumann and Ulam, and already discussed in several posts here]. Including results in functional spaces, as demonstrated by a multifaceted talk by Sergios Agapiou who merged debiasing, deburning, and perfect sampling.

From a general perspective on unbiasing, while there exist sufficient conditions to ensure finite variance and aim at an optimal version, I feel a broader perspective should be adopted towards comparing those estimators with biased versions that take less time to compute. In a diffusion context, Chang-han Rhee presented a detailed argument as to why his debiasing solution achieves a O(√n) convergence rate in opposition the regular discretised diffusion, but multi-level Monte Carlo also achieves this convergence speed. We had a nice discussion about this point at the break, with my slow understanding that continuous time processes had much much stronger reasons for sticking to unbiasedness. At the poster session, I had the nice surprise of reading a poster on the penalty method I discussed the same morning! Used for subsampling when scaling MCMC.

On the second day, Gareth Roberts talked about the Zig-Zag algorithm (which reminded me of the cigarette paper brand). This method has connections with slice sampling but it is a continuous time method which, in dimension one, means running a constant velocity particle that starts at a uniform value between 0 and the maximum density value and proceeds horizontally until it hits the boundary, at which time it moves to another uniform. Roughly. More specifically, this approach uses piecewise deterministic Markov processes, with a radically new approach to simulating complex targets based on continuous time simulation. With computing times that [counter-intuitively] do not increase with the sample size.

Mark Huber gave another exciting talk around the Bernoulli factory problem, connecting with perfect simulation and demonstrating this is not solely a formal Monte Carlo problem! Some earlier posts here have discussed papers on that problem, but I was unaware of the results bounding [from below] the expected number of steps to simulate B(f(p)) from a (p,1-p) coin. If not of the open questions surrounding B(2p). The talk was also great in that it centred on recursion and included a fundamental theorem of perfect sampling! Not that surprising given Mark’s recent book on the topic, but exhilarating nonetheless!!!

The final talk of the second day was given by Peter Glynn, with connections with Chang-han Rhee’s talk the previous day, but with a different twist. In particular, Peter showed out to achieve perfect or exact estimation rather than perfect or exact simulation by a fabulous trick: perfect sampling is better understood through the construction of random functions φ¹, φ², … such that X²=φ¹(X¹), X³=φ²(X²), … Hence,


which helps in constructing coupling strategies. However, since the φ’s are usually iid, the above is generally distributed like


which seems pretty similar but offers a much better concentration as t grows. Cutting the function composition is then feasible towards producing unbiased estimators and more efficient. (I realise this is not a particularly clear explanation of the idea, detailed in an arXival I somewhat missed. When seen this way, Y would seem much more expensive to compute [than X].)

coupled filters

Posted in Kids, Statistics, University life with tags , , , , , , , , , on July 11, 2016 by xi'an

couplartPierre Jacob, Fredrik Lindsten, and Thomas Schön recently arXived a paper on coupled particle filters. A coupling problem that proves to be much more complicated than expected, due to the discrete nature of particle filters. The starting point of the paper is the use of common (e.g., uniform) random numbers for the generation of each entry in the particle system at each time t, which maximal correlation gets damaged by the resampling steps (even when using the same uniforms). One suggestion for improving the correlation between entries at each time made in the paper is to resort to optimal transport, using the distance between particles as the criterion. A cheaper alternative is inspired from multi-level Monte Carlo. It builds a joint multinomial distribution by optimising the coupling probability. [Is there any way to iterate this construct instead of considering only the extreme cases of identical values versus independent values?] The authors also recall a “sorted sampling” method proposed by Mike Pitt in 2002, which is to rely on the empirical cdfs derived from the particle systems and on the inverse cdf technique, which is the approach I would have first considered. Possibly with a smooth transform of both ecdf’s in order to optimise the inverse cdf move.  Actually, I have trouble with the notion that the ancestors of a pair of particles should matter. Unless one envisions a correlation of the entire path, but I am ensure how one can make paths correlated (besides coupling). And how this impacts likelihood estimation. As shown in the above excerpt, the coupled approximations produce regular versions and, despite the negative bias, fairly accurate evaluations of likelihood ratios, which is all that matters in an MCMC implementation. The paper also proposes a smoothing algorithm based on Rhee and Glynn (2012) debiasing technique, which operates on expectations against the smoothing distribution (conditional on a value of the parameter θ). Which may connect with the notion of simulating correlated paths. The interesting part is that, due to the coupling, the Rhee and Glynn unbiased estimator has a finite (if random) stopping time.

Computing the variance of a conditional expectation via non-nested Monte Carlo

Posted in Books, pictures, Statistics, University life with tags , , , , on May 26, 2016 by xi'an

Fushimi Inari-Taisha shrine, Kyoto, June 27, 2012The recent arXival by Takashi Goda of Computing the variance of a conditional expectation via non-nested Monte Carlo led me to read it as I could not be certain of the contents from only reading the title! The short paper considers the issue of estimating the variance of a conditional expectation when able to simulate the joint distribution behind the quantity of interest. The second moment E(E[f(X)|Y]²) can be written as a triple integral with two versions of x given y and one marginal y, which means that it can approximated in an unbiased manner by simulating a realisation of y then conditionally two realisations of x. The variance requires a third simulation of x, which the author seems to deem too costly and that he hence replaces with another unbiased version based on two conditional generations only. (He notes that a faster biased version is available with bias going down faster than the Monte Carlo error, which makes the alternative somewhat irrelevant, as it is also costly to derive.) An open question after reading the paper stands with the optimal version of the generic estimator (5), although finding the optimum may require more computing time than it is worth spending. Another one is whether or not this version of the expected conditional variance is more interesting (computation-wise) that the difference between the variance and the expected conditional variance as reproduced in (3) given that both quantities can equally be approximated by unbiased Monte Carlo…