## art brut

Posted in pictures with tags , , , on October 30, 2011 by xi'an

## Selecting statistics for [ABC] Bayesian model choice

Posted in Statistics, University life with tags , , , , , , , , , on October 25, 2011 by xi'an

At last, we have completed, arXived, and submitted our paper on the evaluation of summary statistics for Bayesian model choice! (I had presented preliminary versions at the recent workshops in New York and Zürich.) While broader in scope, the results obtained by Judith Rousseau, Jean-Michel Marin, Natesh Pillai, and myself bring an answer to the question raised by our PNAS paper on ABC model choice. Almost as soon as we realised the problem, that is, during MCMC’Ski in Utah, I talked with Judith about a possible classification of statistics in terms of their Bayes factor performances and we started working on that… While the idea of separating the mean behaviour of the statistics under both model came rather early, establishing a complete theoretical framework that validated this intuition took quite a while and the assumptions changed a few times around the summer. The simulations associated with the paper were straightforward in that (a) the setup had been suggested to us by a referee of our PNAS paper: compare normal and Laplace distributions with different summary statistics (inc. the median absolute deviation), (b) the theoretical results told us what to look for, and (c) they did very clearly exhibit the consistency and inconsistency of the Bayes factor/posterior probability predicted by the theory. Both boxplots shown here exhibit this agreement: when using (empirical) mean, median, and variance to compare normal and Laplace models, the posterior probabilities do not select the “true” model but instead aggregate near a fixed value. When using instead the median absolute deviation as summary statistic, the posterior probabilities concentrate near one or zero depending on whether or not the normal model is the true model.

The main result states that, under some “heavy-duty” assumptions, (a) if the “true” mean of the summary statistic can be recovered for both models under comparison, then the Bayes factor has the same asymptotic behaviour as n to the power -(d1 – d2)/2, irrespective of which one is the true model. (The dimensions d1 and  d2 are the effective dimensions of the asymptotic means of the summary statistic under both models.) Therefore, the Bayes factor always asymptotically selects the model having the smallest effective dimension and cannot be consistent. (b) if, instead, the “true” mean of the summary statistic cannot be represented in the other model, then the Bayes factor  is consistent. This means that, somehow, the best statistics to be used in an ABC approximation to a Bayes factor are ancillary statistics with different mean values under both models. Else, the summary statistic must have enough components to prohibit a parameter under the “wrong” model to meet the “true” mean of the summary statistic.

(As a striking coincidence, Hélene Massam and Géard Letac [re]posted today on arXiv a paper about the behaviour of the Bayes factor for contingency tables when the hyperparameter goes to zero, where they establish the consistency of the said Bayes factor under the sparser model. No Jeffreys-Lindley paradox in that case.)

## Hans Rudolf Künsch’s 60th birthday

Posted in Mountains, pictures, Statistics, Travel, University life with tags , , , , , on October 5, 2011 by xi'an

The colloquium in honour of our friend Hans Ruedi Künsch was superbly organised by Peter Bühlmann, Sara van de Geer, and Marloes Maathuis! It was a pleasure to hear the talks by the other speakers (although fog in Zürich made me miss half of Jim’s talk on volcanoes!), to ponder about Sue Geman’s conjecture on the number of local modes on a mixture likelihood surface, to attend a very pleasant gala dinner, and to celebrate Hans’ numerous contributions to the field and to the community. Not to mention a good recovery run along Zürichsee in the early morning… Here are the slides of my talk, with very little chances from those in Columbia last week (as I did not have time to include the verification of the assumptions in the Laplace example):

## Im Zürich

Posted in Mountains, pictures, Statistics, Travel, University life with tags , , on October 4, 2011 by xi'an

## A colloquium in honor of Hans Künsch

Posted in Statistics, Travel, University life with tags , , , on July 15, 2011 by xi'an

As posted in the recent entry about the colloquium for Mike Titterington’s retiral, I will attend another colloquium this year to mark Hans Künsch’s 60th birthday. Which will give me an opportunity to meet with friends in Zürich later this Autumn. And to celebrate Hans’ contributions to Statistics. Given our current research, I will talk about ABC extensions and validations.

## Colloquium for Mike Titterington

Posted in Statistics, Travel, University life with tags , , , , , , , , on June 3, 2011 by xi'an

The colloquium held today at Glasgow University in honour of Mike Titterington for his retiral was highly enjoyable! First, it was a pleasure to celebrate Mike’s achievements at this (early) stage of his career, along with people from Glasgow but also from all over the UK and even from Australia, among whom a lot of friends. Second, the (other) talks were highly interesting, with Peter Hall talking about the asymptotics of records, Byron Morgan about identifiability in capture-recapture models, Peter Green presenting a graphical diagnostic for spotting divergence between prior and likelihood in multivariate models, and Adrian Bowman illustrating advanced face analysis using principal curves on lips and faces. Third, I got a fair amount of questions and comments about ABC in general and ABC model choice in particular, including David Cox commenting that ABC was an important new topic and suggesting using goodness-of-fit tools for model comparison. The symposium per se ended up with a specially designed cake covering (in sugar!) some of Mike’s academic endeavours during the past years. While a formal affair for which I had to run to get a shirt, the diner was equally enjoyable, including a simultaneously witty and deep after-dinner talk paying tribute to Mike’s contributions by David Cox (who was Mike’s predecessor as editor of Biometrika) and a funny conclusion by John McColl who dug out a 1976 probability assignment he had from Mike that was the Monty Hall problem.

The next celebration of that kind I am taking part in is Hans Künsch’s 60th birthday in Zürich next October. Looking forward to it!

## Hammersley and Handscomb 1964 on line

Posted in Books, R, Statistics with tags , , , , on May 27, 2011 by xi'an

Through the webpage of the Advanced Monte Carlo Methods I & II, given a few years ago by Michael Mascagni at ETH Zürich, I found a link to the scanned version of the 1964 book Monte Carlo Methods by Hammersley and Handscomb. This is a short book, with less than 150 pages, especially if one skips the physics applications, and I will certainly take a look at it in the coming days, following the reading of Halton’s 1970 survey.